=> Bootstrap dependency digest>=20010302: found digest-20111104
=> Bootstrap dependency fetch-[0-9]*: found fetch-1.7
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum SHA1 OK for RasMol_2.7.3.tar.gz
=> Checksum RMD160 OK for RasMol_2.7.3.tar.gz
===> Installing dependencies for rasmol-2.7.3nb2
=> Build dependency imake-[0-9]*: found imake-1.0.3nb1
=> Build dependency imake-[0-9]*: found imake-1.0.3nb1
=> Build dependency imake-[0-9]*: found imake-1.0.3nb1
=> Build dependency kbproto>=1.0.2: found kbproto-1.0.5
=> Build dependency xproto>=7.0.9: found xproto-7.0.18nb1
=> Build dependency xcb-proto>=1.4: found xcb-proto-1.6
=> Build dependency inputproto>=1.4: found inputproto-2.0
=> Build dependency xextproto>=7.0: found xextproto-7.2.0
=> Build dependency checkperms>=1.1: found checkperms-1.11
=> Full dependency libXext>=0.99.0: found libXext-1.1.1
=> Full dependency libXi>=1.0.0: found libXi-1.4.3
===> Overriding tools for rasmol-2.7.3nb2
===> Extracting for rasmol-2.7.3nb2
cd /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/src && /bin/rm -rf RCS doc/RCS src/RCS src/msc/RCS
===> Patching for rasmol-2.7.3nb2
=> Applying pkgsrc patches for rasmol-2.7.3nb2
===> Creating toolchain wrappers for rasmol-2.7.3nb2
===> Configuring for rasmol-2.7.3nb2
/bin/ln -sf /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/doc  /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/src
/bin/ln -sf /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/data /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/src
cd /tmp/pkgsrc/biology/rasmol/work/RasMol_2.7.3/src && /bin/sed "s#@@PREFIX@@#/usr/pkg#" rasmol.h >  rasmol.h.new && /bin/mv rasmol.h.new rasmol.h
=> Checking for portability problems in extracted files
imake -DUseInstalled -I/usr/pkg/lib/X11/config
make Makefiles
make includes
make depend
makedepend  --   -I/usr/pkg/include    -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L 				-D_POSIX_SOURCE -D_XOPEN_SOURCE 				-D_BSD_SOURCE -D_SVID_SOURCE                                 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 				  				  -DFUNCPROTO=15 -DNARROWPROTO   -DRASMOLDIR=\"/usr/pkg/share/doc/rasmol/\"  -D_USE_RASMOL_H_   -DUSE_MAKEDEPEND -- rasmol.c rasmol.h molecule.c molecule.h abstree.c abstree.h        cmndline.c cmndline.h command.c command.h tokens.h transfor.c        transfor.h render.c render.h x11win.c graphics.h pixutils.c        pixutils.h font.h outfile.c outfile.h script.c script.h infile.c        infile.h repres.c repres.h tokens.c cif_fract.c cif_fract.h cif.c        cif.h cif_ctonum.c cif_ctonum.h cif_stx.c        multiple.h multiple.c vector.h vector.c        wbrotate.c wbrotate.c langsel.h langsel.c
makedepend: warning:  rasmol.c (reading /usr/include/stdlib.h, line 33): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/sys/types.h, line 147): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/alloca.h, line 25): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/string.h, line 34): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/stdio.h, line 34): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/_G_config.h, line 15): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/wchar.h, line 52): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/libio.h, line 53): cannot find include file "stdarg.h"
	not in /usr/pkg/include/stdarg.h
	not in /usr/include/stdarg.h
makedepend: warning:  rasmol.c (reading /usr/include/signal.h, line 349): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/unistd.h, line 227): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/sys/socket.h, line 30): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/bits/socket.h, line 29): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  rasmol.c (reading /usr/include/rpc/netdb.h, line 42): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  command.c (reading /usr/include/pwd.h, line 33): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  x11win.c (reading /usr/pkg/include/X11/Xlib.h, line 51): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  x11win.c (reading /usr/include/sys/shm.h, line 25): cannot find include file "stddef.h"
	not in /usr/pkg/include/stddef.h
	not in /usr/include/stddef.h
makedepend: warning:  cif_ctonum.c, line 187: cannot find include file "float.h"
	not in /usr/pkg/include/float.h
	not in /usr/include/float.h
makedepend: warning:  multiple.c, line 135: cannot find include file "stdarg.h"
	not in /usr/pkg/include/stdarg.h
	not in /usr/include/stdarg.h