biology/ncbi-blast+ - The NetBSD Packages Collection

NCBI implementation of Basic Local Alignment Search Tool 

The Basic Local Alignment Search Tool (BLAST) finds regions of
local similarity between sequences. The program compares nucleotide
or protein sequences to sequence databases and calculates the
statistical significance of matches.  BLAST can be used to infer
functional and evolutionary relationships between sequences as well
as help identify members of gene families.

Build dependencies

pkgtools/mktools shells/bash devel/gmake lang/perl5 pkgtools/cwrappers

Runtime dependencies

devel/gmp devel/gmp security/gnutls security/libgcrypt security/libgpg-error devel/libidn2 security/libtasn1 databases/lmdb archivers/lzo security/nettle security/nettle security/p11-kit security/p11-kit devel/pcre lang/python312 lang/python312 databases/sqlite3 archivers/zstd devel/gmp security/gnutls security/libgcrypt security/libgpg-error devel/libidn2 security/libtasn1 security/nettle security/p11-kit devel/pcre databases/sqlite3

Binary packages

OSArchitectureVersion
NetBSD 10.0aarch64ncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0aarch64ncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0aarch64ebncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0aarch64ebncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0sparc64ncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0sparc64ncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0x86_64ncbi-blast+-2.14.1nb4.tgz
NetBSD 10.0x86_64ncbi-blast+-2.14.1nb4.tgz
NetBSD 9.0aarch64ncbi-blast+-2.14.1nb4.tgz
NetBSD 9.0sparc64ncbi-blast+-2.14.1nb2.tgz
NetBSD 9.0x86_64ncbi-blast+-2.14.1nb4.tgz
NetBSD 9.0x86_64ncbi-blast+-2.14.1nb4.tgz
NetBSD 9.3x86_64ncbi-blast+-2.14.1nb4.tgz

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

Available build options

(none)

Known vulnerabilities

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.

Problem reports, updates or suggestions for this package should be reported with send-pr.