=> Bootstrap dependency digest>=20010302: found digest-20111104
=> Bootstrap dependency fetch-[0-9]*: found fetch-1.7
=> Checksum SHA1 OK for openbabel-2.3.0.tar.gz
=> Checksum RMD160 OK for openbabel-2.3.0.tar.gz
===> Installing dependencies for openbabel-2.3.0nb8
==========================================================================
The supported build options for openbabel are:

	wx-gui

You can select which build options to use by setting PKG_DEFAULT_OPTIONS
or the following variable.  Its current value is shown:

	PKG_OPTIONS.openbabel (not defined)

==========================================================================
=> Build dependency cmake>=2.8.1nb1: found cmake-2.8.10nb1
=> Build dependency nbpatch-[0-9]*: found nbpatch-20100124
=> Build dependency eigen>=2.0beta3: found eigen-2.0.17
=> Build dependency checkperms>=1.1: found checkperms-1.11
=> Full dependency zlib>=1.2.3: found zlib-1.2.7
=> Full dependency libxml2>=2.8.0nb2: found libxml2-2.9.0nb1
===> Overriding tools for openbabel-2.3.0nb8
===> Extracting for openbabel-2.3.0nb8
===> Patching for openbabel-2.3.0nb8
=> Applying pkgsrc patches for openbabel-2.3.0nb8
===> Creating toolchain wrappers for openbabel-2.3.0nb8
===> Configuring for openbabel-2.3.0nb8
=> Fixing CMAKE_MODULE_PATH in CMakeLists.txt
=> Checking for portability problems in extracted files
-- The C compiler identification is GNU 4.5.2
-- The CXX compiler identification is GNU 4.5.2
CMake Warning (dev) at /usr/pkg/share/cmake-2.8/Modules/Platform/Linux.cmake:51 (include):
  File /usr/pkg/share/cmake-2.8/Modules/Platform/Linux.cmake includes
  /tmp/pkgsrc/biology/openbabel/work/.buildlink/cmake-Modules/Platform/UnixPaths.cmake
  (found via CMAKE_MODULE_PATH) which shadows
  /usr/pkg/share/cmake-2.8/Modules/Platform/UnixPaths.cmake.  This may cause
  errors later on .

  Policy CMP0017 is not set: Prefer files from the CMake module directory
  when including from there.  Run "cmake --help-policy CMP0017" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.
Call Stack (most recent call first):
  /usr/pkg/share/cmake-2.8/Modules/CMakeSystemSpecificInformation.cmake:36 (include)
  CMakeLists.txt:6 (project)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Check for working C compiler: /tmp/pkgsrc/biology/openbabel/work/.wrapper/bin/gcc
-- Check for working C compiler: /tmp/pkgsrc/biology/openbabel/work/.wrapper/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /tmp/pkgsrc/biology/openbabel/work/.wrapper/bin/g++
-- Check for working CXX compiler: /tmp/pkgsrc/biology/openbabel/work/.wrapper/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
Using included inchi library.
-- Found LibXml2: /tmp/pkgsrc/biology/openbabel/work/.buildlink/lib/libxml2.so (found version "2.9.0") 
-- Found ZLIB: /tmp/pkgsrc/biology/openbabel/work/.buildlink/lib/libz.so (found version "1.2.7") 
-- Could NOT find wxWidgets (missing:  wxWidgets_FOUND) 
-- Looking for conio.h
-- Looking for conio.h - not found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for time.h
-- Looking for time.h - found
-- Looking for strings.h
-- Looking for strings.h - found
-- Looking for rpc/xdr.h
-- Looking for rpc/xdr.h - found
-- Looking for regex.h
-- Looking for regex.h - found
-- Looking for C++ include sstream
-- Looking for C++ include sstream - found
-- Looking for rint
-- Looking for rint - not found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for sranddev
-- Looking for sranddev - not found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for dlopen in dl
-- Looking for dlopen in dl - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of clock_t
-- Check size of clock_t - done
-- Performing Test SCANDIR_NEEDS_CONST
-- Performing Test SCANDIR_NEEDS_CONST - Failed
-- Performing Test HAVE_GCC_VISIBILITY
-- Performing Test HAVE_GCC_VISIBILITY - Success
-- Found Eigen2: /tmp/pkgsrc/biology/openbabel/work/.buildlink/include/eigen2  
-- Looking for getopt
-- Looking for getopt - found
GUI will not be built
-- Could NOT find PythonInterp (missing:  PYTHON_EXECUTABLE) 
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pkgsrc/biology/openbabel/work/openbabel-2.3.0
=> Rewrite cmake Dependencies files