=> Bootstrap dependency digest>=20010302: found digest-20111104
=> Bootstrap dependency fetch-[0-9]*: found fetch-1.7
WARNING: [license.mk] Every package should define a LICENSE.
===> Installing for py27-Scientific-2.8
=> Generating pre-install file lists
=> Creating installation directories
(cd /tmp/pkgsrc/math/py-Scientific/work/ScientificPython-2.8/ && /usr/bin/env PKGSRC_PYTHON_NO_EGG=defined DESTDIR=/tmp/pkgsrc/math/py-Scientific/work/.destdir NETCDF_PREFIX=/usr/pkg USETOOLS=no NOGCCERROR=true NOGCCERROR=true PTHREAD_CFLAGS=\ -pthread\  PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS=-lpthread\ -lrt PTHREADBASE=/usr DL_CFLAGS= DL_LDFLAGS= DL_LIBS= PYTHON=/usr/pkg/bin/python2.7 CC=gcc CFLAGS=-O3\ -pipe\ -fstack-protector\ -I/usr/pkg/include\ -I/usr/include CPPFLAGS=-I/usr/pkg/include\ -I/usr/include CXX=g++ CXXFLAGS=-O3\ -pipe\ -fstack-protector\ -I/usr/pkg/include\ -I/usr/include COMPILER_RPATH_FLAG=-Wl,-R F77=f77 FC=f77 FFLAGS=-O LANG=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/pkg/lib\ -Wl,-R/usr/pkg/lib\ -L/usr/lib64\ -Wl,-R/usr/lib64 LINKER_RPATH_FLAG=-R PATH=/tmp/pkgsrc/math/py-Scientific/work/.wrapper/bin:/tmp/pkgsrc/math/py-Scientific/work/.buildlink/bin:/tmp/pkgsrc/math/py-Scientific/work/.gcc/bin:/tmp/pkgsrc/math/py-Scientific/work/.tools/bin:/usr/pkg/bin:/bin:/usr/bin:/usr/pkg/bin:/usr/pkg/bin PREFIX=/usr/pkg PKG_SYSCONFDIR=/usr/pkg/etc CXXCPP=cpp HOME=/tmp/pkgsrc/math/py-Scientific/work/.home CPP=cpp LINK_ALL_LIBGCC_HACK= LOCALBASE=/usr/pkg NO_WHOLE_ARCHIVE_FLAG=-Wl,--no-whole-archive WHOLE_ARCHIVE_FLAG=-Wl,--whole-archive X11BASE=/usr/pkg X11PREFIX=/usr/pkg PKGMANDIR=share/man PKGINFODIR=share/info MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ pbulk\ -g\ pbulk\ -m\ 2555 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 664 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 775 INSTALL_INFO= MAKEINFO=/tmp/pkgsrc/math/py-Scientific/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/tmp/pkgsrc/math/py-Scientific/work/.buildlink/lib/pkgconfig:/tmp/pkgsrc/math/py-Scientific/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/tmp/pkgsrc/math/py-Scientific/work/.pkg-config.log PKG_CONFIG_PATH= WRAPPER_DEBUG=no WRAPPER_UPDATE_CACHE=yes VIEWBASE=/usr/pkg  /usr/pkg/bin/python2.7 setup.py  "install"  -c -O1  --root=/tmp/pkgsrc/math/py-Scientific/work/.destdir)
Using netCDF installation in  /usr/pkg
running install
running build
running build_py
running build_ext
running build_scripts
running install_lib
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets
copying build/lib.linux-x86_64-2.7/Scientific/QtWidgets/QtPlotCanvas.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets
copying build/lib.linux-x86_64-2.7/Scientific/QtWidgets/QtVisualizationCanvas.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets
copying build/lib.linux-x86_64-2.7/Scientific/QtWidgets/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets
copying build/lib.linux-x86_64-2.7/Scientific/QtWidgets/qt_fake.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets
copying build/lib.linux-x86_64-2.7/Scientific/LA.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
copying build/lib.linux-x86_64-2.7/Scientific/DictWithDefault.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/Objects3D.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/VectorModule.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/TensorAnalysis.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/TensorModule.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/Quaternion.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
copying build/lib.linux-x86_64-2.7/Scientific/Geometry/Transformation.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Threading
copying build/lib.linux-x86_64-2.7/Scientific/Threading/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Threading
copying build/lib.linux-x86_64-2.7/Scientific/Threading/TaskManager.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Threading
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/VPython.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/VRML.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/VMD.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/PyMOL.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/VRML2.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/Visualization/Color.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization
copying build/lib.linux-x86_64-2.7/Scientific/N.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
copying build/lib.linux-x86_64-2.7/Scientific/indexing.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing
copying build/lib.linux-x86_64-2.7/Scientific/DistributedComputing/MasterSlave.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing
copying build/lib.linux-x86_64-2.7/Scientific/DistributedComputing/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing
copying build/lib.linux-x86_64-2.7/Scientific/DistributedComputing/TaskManager.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/BSP/Console.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/BSP/core.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/BSP/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/BSP/IO.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/BSP/RemoteObjects.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP
copying build/lib.linux-x86_64-2.7/Scientific/__pkginfo__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/Polynomial.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/FirstDerivatives.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/FindRoot.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/Romberg.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/LeastSquares.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/Rational.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/Derivatives.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/Functions/Interpolation.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions
copying build/lib.linux-x86_64-2.7/Scientific/FFT.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
copying build/lib.linux-x86_64-2.7/Scientific/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
copying build/lib.linux-x86_64-2.7/Scientific/NumberDict.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI
copying build/lib.linux-x86_64-2.7/Scientific/MPI/core.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI
copying build/lib.linux-x86_64-2.7/Scientific/MPI/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI
copying build/lib.linux-x86_64-2.7/Scientific/MPI/IO.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Clustering
copying build/lib.linux-x86_64-2.7/Scientific/Clustering/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Clustering
copying build/lib.linux-x86_64-2.7/Scientific/Clustering/AffinityPropagation.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Clustering
copying build/lib.linux-x86_64-2.7/Scientific/Mathematica.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
copying build/lib.linux-x86_64-2.7/Scientific/NRNG.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Statistics
copying build/lib.linux-x86_64-2.7/Scientific/Statistics/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Statistics
copying build/lib.linux-x86_64-2.7/Scientific/Statistics/Histogram.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Statistics
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets
copying build/lib.linux-x86_64-2.7/Scientific/TkWidgets/Utility.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets
copying build/lib.linux-x86_64-2.7/Scientific/TkWidgets/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets
copying build/lib.linux-x86_64-2.7/Scientific/TkWidgets/TkPlotCanvas.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets
copying build/lib.linux-x86_64-2.7/Scientific/TkWidgets/TkVisualizationCanvas.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/FortranFormat.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/TextFile.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/PDBExportFilters.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/ArrayIO.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/NetCDF.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/PDB.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
copying build/lib.linux-x86_64-2.7/Scientific/IO/PDBSpaceGroups.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
copying build/lib.linux-x86_64-2.7/Scientific/linux2/Scientific_netcdf.so -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
copying build/lib.linux-x86_64-2.7/Scientific/linux2/Scientific_vector.so -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
copying build/lib.linux-x86_64-2.7/Scientific/linux2/Scientific_interpolation.so -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
copying build/lib.linux-x86_64-2.7/Scientific/linux2/Scientific_affinitypropagation.so -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
copying build/lib.linux-x86_64-2.7/Scientific/linux2/Scientific_numerics_package_id.so -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics
copying build/lib.linux-x86_64-2.7/Scientific/Physics/PhysicalQuantities.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics
copying build/lib.linux-x86_64-2.7/Scientific/Physics/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics
copying build/lib.linux-x86_64-2.7/Scientific/Physics/Potential.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Signals
copying build/lib.linux-x86_64-2.7/Scientific/Signals/Models.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Signals
copying build/lib.linux-x86_64-2.7/Scientific/Signals/__init__.py -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Signals
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets/QtPlotCanvas.py to QtPlotCanvas.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets/QtVisualizationCanvas.py to QtVisualizationCanvas.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/QtWidgets/qt_fake.py to qt_fake.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/LA.py to LA.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DictWithDefault.py to DictWithDefault.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/Objects3D.py to Objects3D.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/VectorModule.py to VectorModule.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/TensorAnalysis.py to TensorAnalysis.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/TensorModule.py to TensorModule.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/Quaternion.py to Quaternion.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Geometry/Transformation.py to Transformation.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Threading/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Threading/TaskManager.py to TaskManager.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/VPython.py to VPython.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/VRML.py to VRML.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/VMD.py to VMD.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/PyMOL.py to PyMOL.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/VRML2.py to VRML2.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Visualization/Color.py to Color.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/N.py to N.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/indexing.py to indexing.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing/MasterSlave.py to MasterSlave.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/DistributedComputing/TaskManager.py to TaskManager.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP/Console.py to Console.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP/core.py to core.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP/IO.py to IO.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/BSP/RemoteObjects.py to RemoteObjects.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/__pkginfo__.py to __pkginfo__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/Polynomial.py to Polynomial.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/FirstDerivatives.py to FirstDerivatives.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/FindRoot.py to FindRoot.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/Romberg.py to Romberg.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/LeastSquares.py to LeastSquares.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/Rational.py to Rational.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/Derivatives.py to Derivatives.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Functions/Interpolation.py to Interpolation.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/FFT.py to FFT.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/NumberDict.py to NumberDict.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI/core.py to core.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/MPI/IO.py to IO.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Clustering/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Clustering/AffinityPropagation.py to AffinityPropagation.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Mathematica.py to Mathematica.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/NRNG.py to NRNG.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Statistics/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Statistics/Histogram.py to Histogram.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets/Utility.py to Utility.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets/TkPlotCanvas.py to TkPlotCanvas.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/TkWidgets/TkVisualizationCanvas.py to TkVisualizationCanvas.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/FortranFormat.py to FortranFormat.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/TextFile.py to TextFile.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/PDBExportFilters.py to PDBExportFilters.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/ArrayIO.py to ArrayIO.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/NetCDF.py to NetCDF.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/PDB.py to PDB.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/IO/PDBSpaceGroups.py to PDBSpaceGroups.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics/PhysicalQuantities.py to PhysicalQuantities.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics/__init__.py to __init__.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Physics/Potential.py to Potential.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Signals/Models.py to Models.pyc
byte-compiling /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/Signals/__init__.py to __init__.pyc
writing byte-compilation script '/tmp/tmpdp3jru.py'
/usr/pkg/bin/python2.7 -O /tmp/tmpdp3jru.py
removing /tmp/tmpdp3jru.py
running install_headers
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7
creating /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/mpimodule.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/PyBSP_API.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/netcdfmodule.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/bspmodule.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/arrayobject.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying Include/Scientific/PyMPI_API.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
copying /usr/pkg/include/netcdf.h -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/include/python2.7/Scientific
running install_scripts
copying build/scripts-2.7/task_manager -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/bin
copying build/scripts-2.7/bsp_virtual -> /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/bin
changing mode of /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/bin/task_manager to 755
changing mode of /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/bin/bsp_virtual to 755
/usr/bin/install -c -s -o pbulk -g pbulk -m 755 /tmp/pkgsrc/math/py-Scientific/work/ScientificPython-2.8/Src/MPI/mpipython  /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/bin/mpipython2.7
=> Automatic manual page handling
=> Generating post-install file lists
pkg_create: can't stat `/tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_affinitypropagation.so'
pkg_create: can't stat `/tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_interpolation.so'
pkg_create: can't stat `/tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_netcdf.so'
pkg_create: can't stat `/tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_numerics_package_id.so'
pkg_create: can't stat `/tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_vector.so'
=> Checking file-check results for py27-Scientific-2.8
ERROR: ************************************************************
ERROR: The following files are in the PLIST but not in /usr/pkg:
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_affinitypropagation.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_interpolation.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_netcdf.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_numerics_package_id.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux3/Scientific_vector.so
ERROR: ************************************************************
ERROR: The following files are in /usr/pkg but not in the PLIST:
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2/Scientific_affinitypropagation.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2/Scientific_interpolation.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2/Scientific_netcdf.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2/Scientific_numerics_package_id.so
ERROR:         /tmp/pkgsrc/math/py-Scientific/work/.destdir/usr/pkg/lib/python2.7/site-packages/Scientific/linux2/Scientific_vector.so
*** Error code 1

Stop.
bmake: stopped in /usr/pkgsrc/math/py-Scientific
*** Error code 1

Stop.
bmake: stopped in /usr/pkgsrc/math/py-Scientific