=> Bootstrap dependency digest>=20010302: found digest-20111104 => Bootstrap dependency fetch-[0-9]*: found fetch-1.7 WARNING: [license.mk] Every package should define a LICENSE. ===> Building for mcsim-5.4.0 --- all --- /usr/pkg/bin/bmake all-recursive --- all-recursive --- Making all in mod --- getopt.o --- --- lex.o --- --- lexerr.o --- --- lexfn.o --- --- mod.o --- --- getopt.o --- gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT getopt.o -MD -MP -MF .deps/getopt.Tpo -c -o getopt.o getopt.c --- lex.o --- gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT lex.o -MD -MP -MF .deps/lex.Tpo -c -o lex.o lex.c --- lexerr.o --- gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT lexerr.o -MD -MP -MF .deps/lexerr.Tpo -c -o lexerr.o lexerr.c --- lexfn.o --- gcc 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.deps/strutil.Po --- lex.o --- mv -f .deps/lex.Tpo .deps/lex.Po --- modiSBML.o --- mv -f .deps/modiSBML.Tpo .deps/modiSBML.Po --- modo.o --- mv -f .deps/modo.Tpo .deps/modo.Po --- mod --- /bin/sh ../libtool --tag=CC --mode=link gcc -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o mod getopt.o lex.o lexerr.o lexfn.o mod.o modd.o modi.o modiSBML.o modiSBML2.o modo.o strutil.o -lm -lgslcblas libtool: link: gcc -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -Wl,-R/usr/pkg/lib -o mod getopt.o lex.o lexerr.o lexfn.o mod.o modd.o modi.o modiSBML.o modiSBML2.o modo.o strutil.o -L/tmp/pkgsrc/math/mcsim/work/.buildlink/lib /tmp/pkgsrc/math/mcsim/work/.buildlink/lib/libgslcblas.so -lm -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib Making all in sim --- getopt.lo --- --- lex.lo --- --- lexerr.lo --- --- lexfn.lo --- --- list.lo --- --- getopt.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT getopt.lo -MD -MP -MF .deps/getopt.Tpo -c -o getopt.lo getopt.c --- lex.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT lex.lo -MD -MP -MF .deps/lex.Tpo -c -o lex.lo lex.c --- lexerr.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT lexerr.lo -MD -MP -MF .deps/lexerr.Tpo -c -o lexerr.lo lexerr.c --- lexfn.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT lexfn.lo -MD -MP -MF .deps/lexfn.Tpo -c -o lexfn.lo lexfn.c --- 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.deps/simmonte.Tpo -c simmonte.c -fPIC -DPIC -o .libs/simmonte.o --- simi.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT simi.lo -MD -MP -MF .deps/simi.Tpo -c simi.c -o simi.o >/dev/null 2>&1 --- siminit.lo --- mv -f .deps/siminit.Tpo .deps/siminit.Plo --- simo.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT simo.lo -MD -MP -MF .deps/simo.Tpo -c -o simo.lo simo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT simo.lo -MD -MP -MF .deps/simo.Tpo -c simo.c -fPIC -DPIC -o .libs/simo.o --- simmonte.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT simmonte.lo -MD -MP -MF .deps/simmonte.Tpo -c simmonte.c -o simmonte.o >/dev/null 2>&1 --- simo.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT simo.lo -MD -MP -MF .deps/simo.Tpo -c simo.c -o simo.o >/dev/null 2>&1 --- simmonte.lo --- mv -f .deps/simmonte.Tpo .deps/simmonte.Plo --- strutil.lo --- --- mh.lo --- mv -f .deps/mh.Tpo .deps/mh.Plo --- strutil.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT strutil.lo -MD -MP -MF .deps/strutil.Tpo -c -o strutil.lo strutil.c --- yourcode.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT yourcode.lo -MD -MP -MF .deps/yourcode.Tpo -c -o yourcode.lo yourcode.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT yourcode.lo -MD -MP -MF .deps/yourcode.Tpo -c yourcode.c -fPIC -DPIC -o .libs/yourcode.o --- strutil.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT strutil.lo -MD -MP -MF .deps/strutil.Tpo -c strutil.c -fPIC -DPIC -o .libs/strutil.o --- simo.lo --- mv -f .deps/simo.Tpo .deps/simo.Plo --- libmodelu_la-modelu.lo --- --- strutil.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT strutil.lo -MD -MP -MF .deps/strutil.Tpo -c strutil.c -o strutil.o >/dev/null 2>&1 --- libmodelu_la-modelu.lo --- /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -ffloat-store -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -MT libmodelu_la-modelu.lo -MD -MP -MF .deps/libmodelu_la-modelu.Tpo -c -o libmodelu_la-modelu.lo `test -f 'modelu.c' || echo './'`modelu.c --- yourcode.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT yourcode.lo -MD -MP -MF .deps/yourcode.Tpo -c yourcode.c -o yourcode.o >/dev/null 2>&1 --- strutil.lo --- mv -f .deps/strutil.Tpo .deps/strutil.Plo --- libmodelu_la-modelu.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -ffloat-store -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT libmodelu_la-modelu.lo -MD -MP -MF .deps/libmodelu_la-modelu.Tpo -c modelu.c -fPIC -DPIC -o .libs/libmodelu_la-modelu.o --- simi.lo --- mv -f .deps/simi.Tpo .deps/simi.Plo --- yourcode.lo --- mv -f .deps/yourcode.Tpo .deps/yourcode.Plo --- libmodelu_la-modelu.lo --- libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/tmp/pkgsrc/math/mcsim/work/.buildlink/include -ffloat-store -O3 -pipe -fstack-protector -Wno-format -fno-builtin -MT libmodelu_la-modelu.lo -MD -MP -MF .deps/libmodelu_la-modelu.Tpo -c modelu.c -o libmodelu_la-modelu.o >/dev/null 2>&1 --- lsodes1.lo --- mv -f .deps/lsodes1.Tpo .deps/lsodes1.Plo --- libmodelu_la-modelu.lo --- mv -f .deps/libmodelu_la-modelu.Tpo .deps/libmodelu_la-modelu.Plo --- libmodelu.la --- /bin/sh ../libtool --tag=CC --mode=link gcc -ffloat-store -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libmodelu.la -rpath /usr/pkg/lib libmodelu_la-modelu.lo -lm -lgslcblas libtool: link: gcc -shared .libs/libmodelu_la-modelu.o -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib -L/tmp/pkgsrc/math/mcsim/work/.buildlink/lib /tmp/pkgsrc/math/mcsim/work/.buildlink/lib/libgslcblas.so -lm -Wl,-R/usr/pkg/lib -Wl,-soname -Wl,libmodelu.so.0 -o .libs/libmodelu.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libmodelu.so.0" && ln -s "libmodelu.so.0.0.0" "libmodelu.so.0") libtool: link: (cd ".libs" && rm -f "libmodelu.so" && ln -s "libmodelu.so.0.0.0" "libmodelu.so") libtool: link: ar cru .libs/libmodelu.a libmodelu_la-modelu.o libtool: link: ranlib .libs/libmodelu.a libtool: link: ( cd ".libs" && rm -f "libmodelu.la" && ln -s "../libmodelu.la" "libmodelu.la" ) --- libmcsim.la --- /bin/sh ../libtool --tag=CC --mode=link gcc -O3 -pipe -fstack-protector -Wno-format -fno-builtin -I/usr/pkg/include -lgsl -lgslcblas -lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libmcsim.la -rpath /usr/pkg/lib getopt.lo lex.lo lexerr.lo lexfn.lo list.lo lsodes1.lo lsodes2.lo matutil.lo matutilo.lo mh.lo optdsign.lo random.lo sim.lo simi.lo siminit.lo simmonte.lo simo.lo strutil.lo yourcode.lo libmodelu.la -lm -lgslcblas libtool: link: gcc -shared .libs/getopt.o .libs/lex.o .libs/lexerr.o .libs/lexfn.o .libs/list.o .libs/lsodes1.o .libs/lsodes2.o .libs/matutil.o .libs/matutilo.o .libs/mh.o .libs/optdsign.o .libs/random.o .libs/sim.o .libs/simi.o .libs/siminit.o .libs/simmonte.o .libs/simo.o .libs/strutil.o .libs/yourcode.o -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0/sim/.libs -Wl,-rpath -Wl,/tmp/pkgsrc/math/mcsim/work/.buildlink/lib -Wl,-rpath -Wl,/usr/pkg/lib /tmp/pkgsrc/math/mcsim/work/.buildlink/lib/libgsl.so -L/tmp/pkgsrc/math/mcsim/work/.buildlink/lib ./.libs/libmodelu.so /tmp/pkgsrc/math/mcsim/work/.buildlink/lib/libgslcblas.so -lm -Wl,-R/usr/pkg/lib -Wl,-soname -Wl,libmcsim.so.0 -o .libs/libmcsim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libmcsim.so.0" && ln -s "libmcsim.so.0.0.0" "libmcsim.so.0") libtool: link: (cd ".libs" && rm -f "libmcsim.so" && ln -s "libmcsim.so.0.0.0" "libmcsim.so") libtool: link: ar cru .libs/libmcsim.a getopt.o lex.o lexerr.o lexfn.o list.o lsodes1.o lsodes2.o matutil.o matutilo.o mh.o optdsign.o random.o sim.o simi.o siminit.o simmonte.o simo.o strutil.o yourcode.o libtool: link: ranlib .libs/libmcsim.a libtool: link: ( cd ".libs" && rm -f "libmcsim.la" && ln -s "../libmcsim.la" "libmcsim.la" ) Making all in doc --- mcsim.dvi --- TEXINPUTS=".:$TEXINPUTS" MAKEINFO='/tmp/pkgsrc/math/mcsim/work/.tools/bin/makeinfo -I .' texi2dvi mcsim.texinfo You don't have a working TeX binary (tex) installed anywhere in your PATH, and texi2dvi cannot proceed without one. If you want to use this script, you'll need to install TeX (if you don't have it) or change your PATH or TEX environment variable (if you do). See the --help output for more details. For information about obtaining TeX, please see http://www.tug.org. If you happen to be using Debian, you can get it with this command: apt-get install tetex-bin *** [mcsim.dvi] Error code 1 bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0/doc 1 error bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0/doc *** [all-recursive] Error code 1 bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0 1 error bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0 *** [all] Error code 2 bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0 1 error bmake: stopped in /tmp/pkgsrc/math/mcsim/work/mcsim-5.4.0 *** Error code 2 Stop. bmake: stopped in /usr/pkgsrc/math/mcsim *** Error code 1 Stop. bmake: stopped in /usr/pkgsrc/math/mcsim