=> Bootstrap dependency digest>=20010302: found digest-20160304
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
=> Checksum SHA1 OK for gdal-2.2.4.tar.gz
=> Checksum RMD160 OK for gdal-2.2.4.tar.gz
=> Checksum SHA512 OK for gdal-2.2.4.tar.gz
===> Installing dependencies for py36-gdal-2.2.4nb1
==========================================================================
The following variables will affect the build process of this package,
py36-gdal-2.2.4nb1. Their current value is shown below:
* JPEG_DEFAULT = jpeg
* KRB5_DEFAULT = heimdal
* PYTHON_VERSION_DEFAULT = 27
* SSLBASE = /usr
* SSLCERTS = /etc/openssl/certs
* SSLDIR = /etc/openssl
* SSLKEYS = /etc/openssl/private
Based on these variables, the following variables have been set:
* JPEGBASE (defined, but empty)
* JPEG_TYPE = jpeg
* KRB5BASE (defined, but empty)
* KRB5_TYPE = heimdal
* PYPACKAGE = python36
You may want to abort the process now with CTRL-C and change their value
before continuing. Be sure to run `/usr/bin/make clean' after
the changes.
==========================================================================
=> Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb1
=> Tool dependency gmake>=3.81: found gmake-4.1nb4
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
=> Full dependency gdal-lib>=2.2.4nb2: found gdal-lib-2.2.4nb2
=> Full dependency python36>=3.6.0: found python36-3.6.5nb1
=> Full dependency py36-numpy>=1.0: found py36-numpy-1.14.5
===> Overriding tools for py36-gdal-2.2.4nb1
===> Extracting for py36-gdal-2.2.4nb1
===> Patching for py36-gdal-2.2.4nb1
=> Applying pkgsrc patches for py36-gdal-2.2.4nb1
=> Verifying /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-apps_GNUmakefile
=> Applying pkgsrc patch /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-apps_GNUmakefile
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-apps_GNUmakefile,v 1.1 2018/03/21 22:40:06 gdt Exp $
|
|Avoid setting executable bits on a header file. Not yet reported
|upstream.
|
|--- apps/GNUmakefile.orig 2017-09-15 10:37:46.000000000 +0000
|+++ apps/GNUmakefile
--------------------------
Patching file apps/GNUmakefile using Plan A...
Hunk #1 succeeded at 216.
done
=> Verifying /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-frmts_grib_degrib18_degrib_myutil.c
=> Applying pkgsrc patch /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-frmts_grib_degrib18_degrib_myutil.c
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-frmts_grib_degrib18_degrib_myutil.c,v 1.2 2018/02/19 12:05:17 ryoon Exp $
|
|fix build on SunOS
|--- frmts/grib/degrib18/degrib/myutil.c.orig 2017-11-20 10:45:40.000000000 +0000
|+++ frmts/grib/degrib18/degrib/myutil.c
--------------------------
Patching file frmts/grib/degrib18/degrib/myutil.c using Plan A...
Hunk #1 succeeded at 23.
done
=> Verifying /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-ogr_ogrsf__frmts_geojson_libjson_GNUmakefile
=> Applying pkgsrc patch /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-ogr_ogrsf__frmts_geojson_libjson_GNUmakefile
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ogr_ogrsf__frmts_geojson_libjson_GNUmakefile,v 1.2 2018/02/19 12:05:17 ryoon Exp $
|
|Raise _XOPEN_SOURCE to 600 (for SunOS).
|
|--- ogr/ogrsf_frmts/geojson/libjson/GNUmakefile.orig 2017-11-20 10:45:35.000000000 +0000
|+++ ogr/ogrsf_frmts/geojson/libjson/GNUmakefile
--------------------------
Patching file ogr/ogrsf_frmts/geojson/libjson/GNUmakefile using Plan A...
Hunk #1 succeeded at 21.
done
=> Verifying /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-port_cpl__conv.cpp
=> Applying pkgsrc patch /data/pkgsrc/geography/py-gdal/../../geography/gdal-lib/patches/patch-port_cpl__conv.cpp
Hmm... Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-port_cpl__conv.cpp,v 1.1 2018/02/19 12:05:17 ryoon Exp $
|
|* Fix build under NetBSD
|
|--- port/cpl_conv.cpp.orig 2017-11-20 10:45:32.000000000 +0000
|+++ port/cpl_conv.cpp
--------------------------
Patching file port/cpl_conv.cpp using Plan A...
Hunk #1 succeeded at 45.
done
===> Creating toolchain wrappers for py36-gdal-2.2.4nb1
===> Configuring for py36-gdal-2.2.4nb1
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Replacing python interpreter in swig/python/scripts/*py.
=> Fixing locale directory references.
INFO: [subst.mk:pkglocaledir] Nothing changed in ./frmts/grass/pkg/Makefile.in.
INFO: [subst.mk:pkglocaledir] Nothing changed in ./frmts/gxf/Makefile.in.
INFO: [subst.mk:pkglocaledir] Nothing changed in ./frmts/iso8211/Makefile.in.
INFO: [subst.mk:pkglocaledir] Nothing changed in ./frmts/sdts/Makefile.in.
INFO: [subst.mk:pkglocaledir] Nothing changed in ./ogr/ogrsf_frmts/amigocloud/pkg/Makefile.in.
=> Checking for portability problems in extracted files
checking build system type... x86_64--netbsd
checking host system type... x86_64--netbsd
checking for x86_64--netbsd-gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
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checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking C_WFLAGS for maximum warnings... -Wall -Wdeclaration-after-statement
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking CXX_WFLAGS for maximum warnings... -Wall
checking whether C compiler accepts -Werror -we10006... no
checking whether C compiler accepts -diag-disable 188,1684,2259,2304,3280,11074,11076... no
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checking whether clang++ supports C++11 features with -std=gnu++11... yes
enabled
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checking whether we are using the GNU C compiler... (cached) yes
checking whether clang accepts -g... (cached) yes
checking for clang option to accept ISO C89... (cached) none needed
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether clang++ -std=gnu++11 accepts -g... (cached) yes
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checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
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checking whether the shell understands "+="... no
checking how to convert x86_64--netbsd file names to x86_64--netbsd format... func_convert_file_noop
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checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
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checking how to associate runtime and link libraries... printf %s\n
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checking for archiver @FILE support... @
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checking command to parse /usr/bin/nm -B output from clang object... ok
checking for sysroot... no
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checking if mt is a manifest tool... no
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yes
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checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
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checking whether to build shared libraries... yes
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checking how to run the C++ preprocessor... clang++ -std=gnu++11 -E
checking for ld used by clang++ -std=gnu++11... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the clang++ -std=gnu++11 linker (/usr/bin/ld) supports shared libraries... error: invalid argument '-std=gnu++11' not allowed with 'C'
yes
checking for clang++ -std=gnu++11 option to produce PIC... -fPIC -DPIC
checking if clang++ -std=gnu++11 PIC flag -fPIC -DPIC works... yes
checking if clang++ -std=gnu++11 static flag -static works... yes
checking if clang++ -std=gnu++11 supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if clang++ -std=gnu++11 supports -c -o file.o... (cached) yes
checking whether the clang++ -std=gnu++11 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... error: invalid argument '-std=gnu++11' not allowed with 'C'
NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking for std::isnan... yes
checking for dlopen in -ldl... no
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checking for sin in -lm... yes
checking for ANSI C header files... (cached) yes
checking assert.h usability... yes
checking assert.h presence... yes
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checking dbmalloc.h usability... no
checking dbmalloc.h presence... no
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checking limits.h usability... yes
checking limits.h presence... yes
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checking locale.h usability... yes
checking locale.h presence... yes
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checking values.h usability... no
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checking float.h usability... yes
checking float.h presence... yes
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checking errno.h usability... yes
checking errno.h presence... yes
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checking direct.h usability... no
checking direct.h presence... no
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checking for 64bit file io... no
checking size of int... 4
checking size of unsigned long... 8
checking size of void*... 8
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checking for statvfs... yes
checking for statvfs64... no
checking for gmtime_r... yes
checking for localtime_r... yes
checking for uselocale... no
checking to enable debug build... no, CFLAGS="-O2 -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6"
checking whether GCC 4.1 atomic builtins are available... yes
checking whether GCC bswap builtins are available... yes
checking for __uint128_t... yes
checking whether SSE is available at compile time... yes
checking whether SSSE3 is available at compile time... yes
checking whether AVX is available at compile time... yes
checking to enable LTO (link time optimization) build... no
checking whether we should hide internal symbols... no
checking for local include/lib path... none
checking for pthread_create in -lpthread... yes
checking for PTHREAD_MUTEX_RECURSIVE... yes
checking for PTHREAD_MUTEX_ADAPTIVE_NP... no
checking for pthread_spinlock_t... yes
checking for 5 args mremap()... yes
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checking for inflateCopy in -lz... yes
using libz library from /usr/include
checking for ld used by GCC... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... /bin/sh: Can't open ./config.rpath
done
checking for iconv... yes
checking for working iconv... yes
checking for iconv declaration...
extern size_t iconv (iconv_t cd, const char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
using ICONV_CPP_CONST="const"
checking for pg_config... no
checking for PostgreSQL... no
checking for G_gisinit_2 in -lgrass5... no
checking for ffopen in -lcfitsio... no
libcfitsio not found - FITS support disabled
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checking csf.h usability... no
checking csf.h presence... no
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using internal csf code.
checking for libpng... checking for png_set_IHDR in -lpng... yes
checking png.h usability... yes
checking png.h presence... yes
checking for png.h... yes
using pre-installed libpng.
checking for libcrunch... dds support disabled.
checking for gta_version in -lgta... no
libgta not found - GTA support disabled
checking for PCIDSK... using internal libpcidsk.
checking for libtiff... using libtiff from /usr/pkg.
checking for TIFFScanlineSize64 in -ltiff... yes
BigTIFF support enabled.
checking for XTIFFClientOpen in -lgeotiff... no
using internal GeoTIFF code.
checking for jpeg_read_scanlines in -ljpeg... yes
checking jpeglib.h usability... yes
checking jpeglib.h presence... yes
checking for jpeglib.h... yes
using pre-installed libjpeg.
checking for jpeg12... disabled, libjpeg or libtiff not internal
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checking gif_lib.h usability... yes
checking gif_lib.h presence... yes
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using pre-installed libgif.
checking ecs.h usability... no
checking ecs.h presence... no
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SOSI support disabled.
checking for MongoCXX... MongoCXX not found.
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checking for nc-config... /usr/pkg/bin/nc-config
checking libnetcdf compiler and linker flags with nc-config...
got version="netCDF 4.6.1", prefix="/usr/pkg",
libs="-L/usr/pkg/lib -lnetcdf", includedir="/usr/pkg/include"
checking for nc_open in -lnetcdf... yes
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checking for HDF4 support in libnetcdf... no
checking for jpc_decode in -ljasper... yes
checking for jp2_decode in -ljasper... yes
checking for pgx_decode in -ljasper... yes
checking for jp2_encode_uuid in -ljasper... no
configure: hacked JasPer version not found, GeoJP2 disabled.
checking openjpeg-2.3/openjpeg.h usability... yes
checking openjpeg-2.3/openjpeg.h presence... yes
checking for openjpeg-2.3/openjpeg.h... yes
checking for opj_stream_set_user_data_length in -lopenjp2... yes
checking for FileGDBAPI... FileGDBAPI not found.
checking for NCScbmOpenFileView in -lNCSEcw... no
checking for NCScbmOpenFileView in -lecwj2... no
checking for Kakadu JPEG2000 support... not requested.
configure: MrSID support disabled.
configure: MrSID/MG4 Lidar support disabled.
checking for JP2Lura support... checking for MSG... not requested
checking for BSB... enabled
checking if Oracle support is enabled... no
checking for GRIB... enabled
enabled
checking for MySQL... no
checking for Ingres... no
checking for Xerces C++ Parser headers in /usr/pkg/include and /usr/pkg/include/xercesc... found
checking for Xerces C++ Parser libraries... found
checking for Xerces C++ Parser... yes
checking if Xerces C++ Parser version is >= 3.1.0... yes
checking for XML_ParserCreate in -lexpat... yes
checking for Expat XML Parser headers in /usr/include... found
checking for Expat XML Parser... yes
checking if Expat XML Parser version is >= 1.95.0... yes
checking for LIBKML... checking for Google libkml... no
check for unixODBC
checking for SQLConnect in -lodbc... no
checking for SQLInstallDriverEx in -lodbcinst... no
check for windows ODBC
checking for main in -lodbc32... no
checking for SQLInstallDriverEx in -lodbccp32... no
checking if Oracle support is enabled... no
checking for DODS... disabled
checking for curl-config... /usr/pkg/bin/curl-config
found libcurl version 7.60.0
checking for curl_global_init in -lcurl... yes
checking for xml2-config... /usr/pkg/bin/xml2-config
checking for xmlParseDoc in -lxml2... no
checking for spatialite... disabled
checking for sqlite3_open in -lsqlite3... yes
checking for SQLite3 library >= 3.0.0... yes
checking for sqlite3_column_table_name in -lsqlite3... yes
configure: rasterlite2 support disabled
checking pcre.h usability... yes
checking pcre.h presence... yes
checking for pcre.h... yes
checking for pcre_compile in -lpcre... yes
checking Checking for Teigha... disabled
configure: IBM Informix DataBlade not supported.
configure: checking whether we should include ESRI SDE support...
ESRI SDE support not requested.
checking for WebPDecodeRGB in -lwebp... yes
checking for geos-config... /usr/pkg/bin/geos-config
checking for GEOS version >= 3.1.0... yes
checking for GEOSversion in -lgeos_c... yes
configure: Using C API from GEOS 3.6.2
checking for sfcgal-config... no
checking qhull/libqhull.h usability... no
checking qhull/libqhull.h presence... no
checking for qhull/libqhull.h... no
checking libqhull/libqhull.h usability... no
checking libqhull/libqhull.h presence... no
checking for libqhull/libqhull.h... no
checking for OpenCL support... no
checking for FreeXL support... checking freexl.h usability... no
checking freexl.h presence... no
checking for freexl.h... no
checking for freexl_open in -lfreexl... no
checking for freexl_open in -lfreexl... no
checking for freexl_open in -lfreexl... no
checking for freexl_open in -lfreexl... no
checking for freexl_open in -lfreexl... no
libfreexl not found - FreeXL support disabled
using internal libjson-c code
checking whether to enable PAM... yes
checking whether to build PDF driver as a plugin... no
checking for poppler... disabled
checking for podofo... disabled
checking for pdfium... disabled
checking how to link PROJ.4 library... link dynamically.
checking GDAL version information from gdal_version.h: 2.2.4
checking for perl bindings... disabled
checking for php bindings... disabled
checking for python bindings... disabled
checking whether we should include Java support... no
checking whether we should include MDB support... no
configure: checking whether we should include rasdaman support...
rasdaman support not requested.
checking whether we should include Armadillo support... no
checking for cryptopp... no
checking for MRF... enabled
checking if sprintf can be overloaded for GDAL compilation... yes
configure: creating ./config.status
config.status: creating GDALmake.opt
config.status: WARNING: 'GDALmake.opt.in' seems to ignore the --datarootdir setting
config.status: creating port/cpl_config.h
config.status: executing libtool commands
rm: libtoolT: No such file or directory
GDAL is now configured for x86_64--netbsd
Installation directory: /usr/pkg
C compiler: clang -DHAVE_AVX_AT_COMPILE_TIME -DHAVE_SSSE3_AT_COMPILE_TIME -DHAVE_SSE_AT_COMPILE_TIME -O2 -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6
C++ compiler: clang++ -std=gnu++11 -DHAVE_AVX_AT_COMPILE_TIME -DHAVE_SSSE3_AT_COMPILE_TIME -DHAVE_SSE_AT_COMPILE_TIME -O2 -I/usr/pkg/include -I/usr/include -I/usr/include/krb5 -I/usr/pkg/include/python3.6
C++11 support: yes
LIBTOOL support: yes
LIBZ support: external
LIBLZMA support: no
cryptopp support: no
GRASS support: no
CFITSIO support: no
PCRaster support: internal
LIBPNG support: external
DDS support: no
GTA support: no
LIBTIFF support: external (BigTIFF=yes)
LIBGEOTIFF support: internal
LIBJPEG support: external
12 bit JPEG: no
12 bit JPEG-in-TIFF: no
LIBGIF support: external
OGDI support: no
HDF4 support: no
HDF5 support: yes
Kea support: no
NetCDF support: yes
Kakadu support: no
JasPer support: yes (GeoJP2=no)
OpenJPEG support: yes
ECW support: no
MrSID support: no
MrSID/MG4 Lidar support: no
JP2Lura support: no
MSG support: no
GRIB support: yes
EPSILON support: no
WebP support: yes
cURL support (wms/wcs/...):yes
PostgreSQL support: no
MRF support: yes
MySQL support: no
Ingres support: no
Xerces-C support: yes
NAS support: yes
Expat support: yes
libxml2 support: no
Google libkml support: no
ODBC support: no
PGeo support: no
FGDB support: no
MDB support: no
PCIDSK support: internal
OCI support: no
GEORASTER support: no
SDE support: no
Rasdaman support: no
DODS support: no
SQLite support: yes
PCRE support: yes
SpatiaLite support: no
RasterLite2 support: no
Teigha (DWG and DGNv8): no
INFORMIX DataBlade support:no
GEOS support: yes
SFCGAL support: no
QHull support: internal
Poppler support: no
Podofo support: no
PDFium support: no
OpenCL support: no
Armadillo support: no
FreeXL support: no
SOSI support: no
MongoDB support: no
SWIG Bindings: no
Statically link PROJ.4: no
enable GNM building: yes
enable pthread support: yes
enable POSIX iconv support:yes
hide internal symbols: no
=> Modifying libtool scripts to use pkgsrc libtool
=> Modifying libtool scripts to use pkgsrc depcomp