=> Bootstrap dependency digest>=20010302: found digest-20160304 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Installing for R-gstat-1.1.2 => Generating pre-install file lists => Creating installation directories /usr/bin/env R_LIBS= DESTDIR=/data/scratch/math/R-gstat/work/.destdir USETOOLS=no CC=clang CFLAGS=-O2\ -I/usr/pkg/include\ -I/usr/include CPPFLAGS=-I/usr/pkg/include\ -I/usr/include CXX=clang++ CXXFLAGS=-O2\ -I/usr/pkg/include\ -I/usr/include COMPILER_RPATH_FLAG=-Wl,-R F77=g77 FC=g77 FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/pkg/lib\ -Wl,-R/usr/pkg/lib\ -L/usr/lib\ -Wl,-R/usr/lib LINKER_RPATH_FLAG=-R PATH=/data/scratch/math/R-gstat/work/.cwrapper/bin:/data/scratch/math/R-gstat/work/.buildlink/bin:/data/scratch/math/R-gstat/work/.tools/bin:/usr/pkg/bin:/usr/bin:/bin:/usr/pkg/bin:/usr/local/bin:/usr/pkg/bin:/usr/pkg/bin PREFIX=/usr/pkg MAKELEVEL=0 CONFIG_SITE= PKG_SYSCONFDIR=/usr/pkg/etc CXXCPP=clang-cpp HOME=/data/scratch/math/R-gstat/work/.home CWRAPPERS_CONFIG_DIR=/data/scratch/math/R-gstat/work/.cwrapper/config CPP=clang-cpp LOCALBASE=/usr/pkg X11BASE=/usr/pkg PKGMANDIR=man PKGINFODIR=info PKGGNUDIR=gnu/ MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ pbulkXXX\ -g\ users\ -m\ 2555 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 664 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 775 INSTALL_INFO= MAKEINFO=/data/scratch/math/R-gstat/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/data/scratch/math/R-gstat/work/.buildlink/lib/pkgconfig:/data/scratch/math/R-gstat/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/data/scratch/math/R-gstat/work/.pkg-config.log PKG_CONFIG_PATH= CWRAPPERS_CONFIG_DIR=/data/scratch/math/R-gstat/work/.cwrapper/config /usr/pkg/bin/R CMD INSTALL -l /data/scratch/math/R-gstat/work/.destdir/usr/pkg/lib/R/library /data/scratch/math/R-gstat/work/gstat * installing *source* package 'gstat' ... ** package 'gstat' successfully unpacked and MD5 sums checked ** libs clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c block.c -o block.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c data.c -o data.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c direct.c -o direct.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c fit.c -o fit.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c gcdist.c -o gcdist.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c getest.c -o getest.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c gls.c -o gls.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c glvars.c -o glvars.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c lm.c -o lm.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c mapio.c -o mapio.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c msim.c -o msim.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c mtrx.c -o mtrx.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c nsearch.c -o nsearch.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c pqueue.c -o pqueue.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c reml.c -o reml.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c s.c -o s.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c select.c -o select.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c sem.c -o sem.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c sim.c -o sim.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c userio.c -o userio.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c utils.c -o utils.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c vario.c -o vario.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c vario_fn.c -o vario_fn.o clang -I/usr/pkg/lib/R/include -DNDEBUG -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -fpic -O2 -pthread -I/usr/include -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/pkg/include/freetype2 -I/usr/include/krb5 -c vario_io.c -o vario_io.o clang -shared -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -pthread -o gstat.so block.o data.o direct.o fit.o gcdist.o getest.o gls.o glvars.o lm.o mapio.o msim.o mtrx.o nsearch.o pqueue.o reml.o s.o select.o sem.o sim.o userio.o utils.o vario.o vario_fn.o vario_io.o -L/usr/pkg/lib/R/lib -lRlapack -L/usr/pkg/lib/gcc-lib/x86_64--netbsd/4.1.2 -L/lib -Wl,-R/usr/lib -Wl,-R/usr/pkg/lib -lf95 -lm -Wl,-R/usr/pkg/lib/gcc-lib/x86_64--netbsd/4.1.2 -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -lR /usr/bin/ld: cannot find -lf95 clang: error: linker command failed with exit code 1 (use -v to see invocation) *** Error code 1 Stop. make: stopped in /data/scratch/math/R-gstat/work/gstat/src ERROR: compilation failed for package 'gstat' * removing '/data/scratch/math/R-gstat/work/.destdir/usr/pkg/lib/R/library/gstat' *** Error code 1 Stop. make[1]: stopped in /data/pkgsrc/math/R-gstat *** Error code 1 Stop. make: stopped in /data/pkgsrc/math/R-gstat