biology/coordgenlibs - The NetBSD Packages Collection

2D coordinate generation for molecules

This is Schroedinger, Inc's 2D coordinate generation.  It was formerly
proprietary code, but is now released under the BSD license.

The emphasis of these algorithms are on quality of 2D coordinates rather than
speed of generation.  The algorithm distinguishes itself from many others by
doing well with both macrocycles and metal complexes.  It also does extremely
well on typical drug-like small molecules, and has been validated on millions
of compounds.

Build dependencies

devel/boost-headers pkgtools/mktools devel/cmake pkgtools/cwrappers

Runtime dependencies

biology/maeparser devel/boost-libs biology/maeparser devel/boost-libs

Binary packages

NetBSD 10.0aarch64coordgenlibs-1.4.2nb6.tgz
NetBSD 10.0earmv6hfcoordgenlibs-1.4.2nb6.tgz
NetBSD 10.0earmv7hfcoordgenlibs-1.4.2nb6.tgz
NetBSD 8.0i386coordgenlibs-1.4.2nb6.tgz
NetBSD 8.0powerpccoordgenlibs-1.4.2nb6.tgz
NetBSD 8.0x86_64coordgenlibs-1.4.2nb6.tgz
NetBSD 9.0aarch64coordgenlibs-1.4.2nb6.tgz
NetBSD 9.0aarch64coordgenlibs-1.4.2nb5.tgz
NetBSD 9.0alphacoordgenlibs-1.4.2nb5.tgz
NetBSD 9.0alphacoordgenlibs-1.4.2nb4.tgz
NetBSD 9.0earmv6hfcoordgenlibs-1.4.2nb6.tgz
NetBSD 9.0earmv6hfcoordgenlibs-1.4.2nb5.tgz
NetBSD 9.0earmv7hfcoordgenlibs-1.4.2nb6.tgz
NetBSD 9.0earmv7hfcoordgenlibs-1.4.2nb5.tgz
NetBSD 9.0i386coordgenlibs-1.4.2nb6.tgz
NetBSD 9.0i386coordgenlibs-1.4.2nb5.tgz
NetBSD 9.0m68kcoordgenlibs-1.4.2nb4.tgz
NetBSD 9.0mips64ebcoordgenlibs-1.4.2nb5.tgz
NetBSD 9.0mips64ebcoordgenlibs-1.4.2nb4.tgz
NetBSD 9.0powerpccoordgenlibs-1.4.2nb6.tgz
NetBSD 9.0powerpccoordgenlibs-1.4.2nb5.tgz
NetBSD 9.0sparc64coordgenlibs-1.4.2nb5.tgz
NetBSD 9.0sparc64coordgenlibs-1.4.2nb4.tgz
NetBSD 9.0x86_64coordgenlibs-1.4.2nb6.tgz
NetBSD 9.0x86_64coordgenlibs-1.4.2nb5.tgz
NetBSD 9.3x86_64coordgenlibs-1.4.2nb6.tgz
NetBSD 9.3x86_64coordgenlibs-1.4.2nb6.tgz

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

Available build options


Known vulnerabilities

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.

Problem reports, updates or suggestions for this package should be reported with send-pr.