biology/biolibc - The NetBSD Packages Collection

Low-level high-performance bioinformatics library

Biolibc is a library of fast, memory-efficient, low-level functions
for processing biological data.  Like libc, it consists of numerous
disparate, general-purpose functions which could be used by a wide
variety of applications.  These include functions for streaming
common file formats such as SAM and VCF, string functions specific
to bioinformatics, etc.

Build dependencies

pkgtools/mktools pkgtools/cwrappers

Runtime dependencies


Binary packages

NetBSD 10.0aarch64biolibc-
NetBSD 10.0aarch64ebbiolibc-0.2.5.tgz
NetBSD 10.0earmv4biolibc-0.2.4.tgz
NetBSD 10.0earmv6hfbiolibc-
NetBSD 10.0earmv6hfbiolibc-0.2.5.tgz
NetBSD 10.0earmv7hfbiolibc-0.2.5.tgz
NetBSD 10.0earmv7hfbiolibc-
NetBSD 10.0i386biolibc-0.2.5.tgz
NetBSD 10.0vaxbiolibc-0.2.5.tgz
NetBSD 10.0vaxbiolibc-0.2.5.tgz
NetBSD 10.0_BETAx86_64biolibc-0.2.5.tgz
NetBSD 8.0i386biolibc-0.2.5.tgz
NetBSD 8.0i386biolibc-0.2.4.tgz
NetBSD 8.0i386biolibc-
NetBSD 8.0powerpcbiolibc-0.2.4.tgz
NetBSD 8.0x86_64biolibc-0.2.5.tgz
NetBSD 8.0x86_64biolibc-0.2.4.tgz
NetBSD 8.0x86_64biolibc-
NetBSD 9.0aarch64biolibc-0.2.4.tgz
NetBSD 9.0aarch64biolibc-
NetBSD 9.0alphabiolibc-0.2.4.tgz
NetBSD 9.0earmbiolibc-0.2.4.tgz
NetBSD 9.0earmv4biolibc-0.2.5.tgz
NetBSD 9.0earmv6hfbiolibc-0.2.5.tgz
NetBSD 9.0earmv6hfbiolibc-0.2.4.tgz
NetBSD 9.0earmv6hfbiolibc-
NetBSD 9.0earmv7hfbiolibc-0.2.5.tgz
NetBSD 9.0earmv7hfbiolibc-0.2.4.tgz
NetBSD 9.0earmv7hfbiolibc-
NetBSD 9.0i386biolibc-0.2.5.tgz
NetBSD 9.0i386biolibc-0.2.4.tgz
NetBSD 9.0i386biolibc-
NetBSD 9.0m68kbiolibc-0.2.4.tgz
NetBSD 9.0mips64ebbiolibc-0.2.4.tgz
NetBSD 9.0mipselbiolibc-0.2.4.tgz
NetBSD 9.0powerpcbiolibc-
NetBSD 9.0powerpcbiolibc-0.2.4.tgz
NetBSD 9.0sh3elbiolibc-0.2.4.tgz
NetBSD 9.0sh3elbiolibc-0.2.5.tgz
NetBSD 9.0sparc64biolibc-0.2.4.tgz
NetBSD 9.0sparcbiolibc-0.2.4.tgz
NetBSD 9.0sparcbiolibc-0.2.5.tgz
NetBSD 9.0vaxbiolibc-0.2.4.tgz
NetBSD 9.0x86_64biolibc-0.2.5.tgz
NetBSD 9.0x86_64biolibc-0.2.4.tgz
NetBSD 9.0x86_64biolibc-
NetBSD 9.3x86_64biolibc-
NetBSD 9.3x86_64biolibc-

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

Available build options


Known vulnerabilities

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.

Problem reports, updates or suggestions for this package should be reported with send-pr.