=> Bootstrap dependency digest>=20010302: found digest-20121220
===> Building for py27-diffpy-pdffit2-1.0-r3067-20090410
(cd /scratch/wip/py-diffpy_pdffit2/work/diffpy.pdffit2-1.0-r3067-20090410/ && /usr/bin/env USETOOLS=no PTHREAD_CFLAGS=\ -pthread\  PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS= PTHREADBASE=/usr DL_CFLAGS=\ -pthread\  DL_LDFLAGS=\ -pthread DL_LIBS= PYTHON=/usr/pkg/bin/python2.7 CC=gcc CFLAGS=-O2\ -I/usr/include\ -I/usr/pkg/include CPPFLAGS=-I/usr/include\ -I/usr/pkg/include CXX=c++ CXXFLAGS=-O2\ -I/usr/include\ -I/usr/pkg/include COMPILER_RPATH_FLAG=-Wl,-R F77=g77 FC=g77 FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/lib\ -Wl,-R/usr/lib\ -L/usr/pkg/lib\ -Wl,-R/usr/pkg/lib LINKER_RPATH_FLAG=-R PATH=/scratch/wip/py-diffpy_pdffit2/work/.wrapper/bin:/scratch/wip/py-diffpy_pdffit2/work/.buildlink/bin:/scratch/wip/py-diffpy_pdffit2/work/.gcc/bin:/scratch/wip/py-diffpy_pdffit2/work/.tools/bin:/usr/pkg/bin:/usr/bin:/bin:/usr/pkg/bin:/usr/local/bin:/usr/pkg/bin:/usr/X11R7/bin PREFIX=/usr/pkg PKG_SYSCONFDIR=/usr/pkg/etc HOME=/scratch/wip/py-diffpy_pdffit2/work/.home CPP=cpp LINK_ALL_LIBGCC_HACK= LOCALBASE=/usr/pkg NO_WHOLE_ARCHIVE_FLAG=-Wl,--no-whole-archive WHOLE_ARCHIVE_FLAG=-Wl,--whole-archive X11BASE=/usr/X11R7 X11PREFIX=/usr/pkg PKGMANDIR=man PKGINFODIR=info PKGGNUDIR=gnu/ MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ kristerw\ -g\ wheel\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ kristerw\ -g\ wheel\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ kristerw\ -g\ wheel\ -m\ 2555 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ kristerw\ -g\ wheel\ -m\ 664 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ kristerw\ -g\ wheel\ -m\ 775 INSTALL_INFO= MAKEINFO=/scratch/wip/py-diffpy_pdffit2/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/scratch/wip/py-diffpy_pdffit2/work/.buildlink/lib/pkgconfig:/scratch/wip/py-diffpy_pdffit2/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/scratch/wip/py-diffpy_pdffit2/work/.pkg-config.log PKG_CONFIG_PATH= WRAPPER_DEBUG=no WRAPPER_UPDATE_CACHE=yes VIEWBASE=/usr/pkg /usr/pkg/bin/python2.7  setup.py  build )
running build
running build_py
creating build
creating build/lib.netbsd-6.0-amd64-2.7
creating build/lib.netbsd-6.0-amd64-2.7/diffpy
copying diffpy/__init__.py -> build/lib.netbsd-6.0-amd64-2.7/diffpy
creating build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2
copying diffpy/pdffit2/__init__.py -> build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2
copying diffpy/pdffit2/output.py -> build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2
copying diffpy/pdffit2/pdffit.py -> build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2
copying diffpy/pdffit2/version.py -> build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2
running build_ext
building 'diffpy.pdffit2.pdffit2' extension
creating build/temp.netbsd-6.0-amd64-2.7
creating build/temp.netbsd-6.0-amd64-2.7/pdffit2module
creating build/temp.netbsd-6.0-amd64-2.7/libpdffit2
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c pdffit2module/bindings.cc -o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/bindings.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c pdffit2module/misc.cc -o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/misc.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from pdffit2module/misc.cc:39:0:
./libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
./libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c pdffit2module/pdffit2module.cc -o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/pdffit2module.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from pdffit2module/pdffit2module.cc:28:0:
./libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
./libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c pdffit2module/pyexceptions.cc -o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/pyexceptions.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/Atom.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/Atom.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/LocalPeriodicTable.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/LocalPeriodicTable.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/OutputStreams.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/OutputStreams.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/PeriodicTable.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/PeriodicTable.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/PointsInSphere.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/PointsInSphere.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/StringUtils.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/StringUtils.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/fit.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/fit.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/fit.cc:34:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/gaussj.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/gaussj.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/metric.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/metric.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/metric.cc:27:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/nrutil.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/nrutil.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/output.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/output.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/output.cc:33:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/parser.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/parser.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/parser.cc:30:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/pdf.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdf.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/pdf.cc:43:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/pdffit.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdffit.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/pdffit.cc:30:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/pdflsmin.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdflsmin.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/pdflsmin.cc:34:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/scatlen.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/scatlen.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/scatlen.cc:29:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
gcc -DNDEBUG -O2 -DHAVE_DB_185_H -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -fPIC -Ilibpdffit2 -Ipdffit2module -I. -I/usr/pkg/include/python2.7 -c libpdffit2/stru.cc -o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/stru.o -Wall -Wno-write-strings -O3 -funroll-loops -ffast-math
In file included from libpdffit2/stru.cc:37:0:
libpdffit2/pdffit.h: In constructor 'Phase::Phase()':
libpdffit2/pdffit.h:543:42: warning: operation on '((Phase*)this)->Phase::a0[1]' may be undefined
c++ -pthread -shared -L/scratch/lang/python27/work/Python-2.7.5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -O2 -I/usr/include -I/usr/pkg/include -I/usr/include -I/usr/pkg/include build/temp.netbsd-6.0-amd64-2.7/pdffit2module/bindings.o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/misc.o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/pdffit2module.o build/temp.netbsd-6.0-amd64-2.7/pdffit2module/pyexceptions.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/Atom.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/LocalPeriodicTable.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/OutputStreams.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/PeriodicTable.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/PointsInSphere.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/StringUtils.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/fit.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/gaussj.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/metric.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/nrutil.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/output.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/parser.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdf.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdffit.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/pdflsmin.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/scatlen.o build/temp.netbsd-6.0-amd64-2.7/libpdffit2/stru.o -lgsl -lgslcblas -lm -lpython2.7 -o build/lib.netbsd-6.0-amd64-2.7/diffpy/pdffit2/pdffit2.so -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib
running build_scripts
creating build/scripts-2.7
copying and adjusting applications/pdffit2 -> build/scripts-2.7
changing mode of build/scripts-2.7/pdffit2 from 644 to 755
=> Unwrapping files-to-be-installed.